BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB002C02LP1|AL424925
(800 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1630 1387 0.0
>3x_Contig1630
Length = 14771
Score = 1387 bits (688), Expect = 0.0
Identities = 767/800 (95%), Gaps = 5/800 (0%)
Strand = Plus / Minus
Query: 1 ttccgwatattttcaactatgatttttcatcatcagaaactgacaaaaaattatgaagca 60
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5825 ttccgaatattttcaactatgatttttcatcatcagaaactgacaaaaaattatgaagca 5766
Query: 61 aaatgttgaattgaaakagttatatyawtyggtcagtgaataaatgtatggcgtaagttc 120
|| ||||||||||||| |||||||| | | ||||||||||||||||| ||||||||||||
Sbjct: 5765 aa-tgttgaattgaaagagttatatcaatcggtcagtgaataaatgt-tggcgtaagttc 5708
Query: 121 aactctkagtttkacttaygtgyactggwtcttawgaaacaatcctgtcaaagataycaa 180
|||||| ||||| ||||| ||| ||||| ||||| ||||||||||||||||||||| |||
Sbjct: 5707 aactctgagtttgacttacgtgcactggatcttaagaaacaatcctgtcaaagataccaa 5648
Query: 181 tgttcaaacaggttttcggattgagcagtagtctgactagactatcgttgcgtaatgttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5647 tgttcaaacaggttttcggattgagcagtagtctgactagactatcgttgcgtaatgttc 5588
Query: 241 gttcaagcatagcatttgcacctaccactgcaacaacgttctttctctatatacttcacc 300
|||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||
Sbjct: 5587 gttcaagcatagcatttgcacc-accactgcaacaacgttctttctc-atatacttcacc 5530
Query: 301 aatacaagccacgttgatacyaaataaagagaggggtcaagcctcctggccgtaagaaga 360
||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||
Sbjct: 5529 aatacaagccacgttga-accaaataaagagaggggtcaagcctcctggccgtaagaaga 5471
Query: 361 tcactgaatccccagatttggaggtatgcccgattcgtaaaggagttgtgctaagagtga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5470 tcactgaatccccagatttggaggtatgcccgattcgtaaaggagttgtgctaagagtga 5411
Query: 421 tggtattgwagccaawgaaacctaatttttctyatatttaagcttgtagagtgagactaa 480
|||||||| |||||| ||||||||||| | || | | ||||||||||||||||| |||
Sbjct: 5410 tggtattgaagccaaagaaacctaattctgctcagagaaaagcttgtagagtgagattaa 5351
Query: 481 ccaatggtaacattgtttctgcatatatcccaggcgaaggccataacgcacaagagcaca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5350 ccaatggtaacattgtttctgcatatatcccaggcgaaggccataacgcacaagagcaca 5291
Query: 541 gtattgtatatgttcgtggaggccgttgccaagatttacctggtgtgaaatatcatgttg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5290 gtattgtatatgttcgtggaggccgttgccaagatttacctggtgtgaaatatcatgttg 5231
Query: 601 tccgtggtgccggtgatttggccggtgttgtcaacagaatcagctccagatcgaagtacg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5230 tccgtggtgccggtgatttggccggtgttgtcaacagaatcagctccagatcgaagtacg 5171
Query: 661 gtgtgaagaaaccaacaaaggagtcagataccaacagtattatattstkaattaycaaca 720
|||||||||||||||||||||||| ||||||||||||||||||||| | ||||| |||||
Sbjct: 5170 gtgtgaagaaaccaacaaaggagtaagataccaacagtattatattctgaattatcaaca 5111
Query: 721 taaaatatatacttatgtttataaactagaccttcatgtaaatatgcgaataatctatct 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5110 taaaatatatacttatgtttataaactagaccttcatgtaaatatgcgaataatctatct 5051
Query: 781 actggktgctcaatctttat 800
||||| ||||||||||||||
Sbjct: 5050 actggttgctcaatctttat 5031
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.40 0.714 1.33
Gapped
Lambda K H
1.40 0.714 1.33
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4735
Number of Sequences: 1807
Number of extensions: 4735
Number of successful extensions: 124
Number of sequences better than 1.0e-20: 1
length of query: 800
length of database: 10,358,551
effective HSP length: 16
effective length of query: 784
effective length of database: 10,329,639
effective search space: 8098436976
effective search space used: 8098436976
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.2 bits)
S1: 12 (24.7 bits)
S2: 50 (101.3 bits)